Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs9313400 chr5:156433341 A/G 6.04E-6 288 12.1 26.4 26.1 KM Plot
KIRP rs9324747 chr5:152760340 A/G 0.000147 279 23.47 26 25.15 KM Plot
KIRP rs936312 chr19:16546127 C/T 9.78E-9 289 11.37 21.97 26 KM Plot
KIRP rs936313 chr19:16546384 A/G 9.78E-9 289 26 21.97 11.37 KM Plot
KIRP rs9373192 chr6:137845909 G/A 2.49E-7 282 25.82 22.8 19.9 KM Plot
KIRP rs9456213 chr6:168980060 C/G 0.000183 283 25.95 26.7 18.2 KM Plot
KIRP rs9461416 chr6:27825860 G/A 2.57E-8 288 25.97 25.2 13.07 KM Plot
KIRP rs9503555 chr6:389319 C/T 1.37E-5 289 10.83 23.5 26.28 KM Plot
KIRP rs9514737 chr13:108425640 A/G 1.91E-5 289 17.13 20.2 26.48 KM Plot
KIRP rs9525542 chr13:42346375 A/T 1.44E-14 289 26 21.93 8.03 KM Plot
KIRP rs9525956 chr13:45038973 C/T 1.48E-11 285 26.18 23.63 6.17 KM Plot
KIRP rs9525957 chr13:45040940 C/T 1.46E-11 285 26.37 23.1 6.17 KM Plot
KIRP rs9532921 chr13:42349617 T/A 1.33E-14 287 25.97 21.68 8.03 KM Plot
KIRP rs9532925 chr13:42376662 C/G 1.33E-14 287 25.97 21.68 8.03 KM Plot
KIRP rs9532926 chr13:42379502 T/C 1.33E-14 287 25.97 21.68 8.03 KM Plot